corHMM (1.20)

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Analysis of Binary Character Evolution.

http://cran.r-project.org/web/packages/corHMM

Fits a hidden rates model that allows different transition rate classes on different portions of a phylogeny by treating rate classes as hidden states in a Markov process and various other functions for evaluating models of binary character evolution.

Maintainer: Jeremy Beaulieu
Author(s): Jeremy M. Beaulieu <jbeaulieu@nimbios.org>, Jeffrey C. Oliver <jeffreycoliver@gmail.com>, Brian O'Meara <bomeara@utk.edu>

License: GPL (>= 2)

Uses: ape, corpcor, expm, GenSA, nloptr, numDeriv, phangorn

Released 9 months ago.


10 previous versions

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Related packages: PHYLOGR, apTreeshape, geiger, ggplot2, ouch, paleoTS, rmetasim, vegan, ape, phangorn, MCMCglmm, metafor, pegas, phylobase, adephylo, phyloclim, BoSSA, phyclust, TreeSim, TreePar(20 best matches, based on common tags.)


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