hapassoc (1.2-8)

1 user

Inference of Trait Associations with SNP Haplotypes and Other Attributes using the EM Algorithm.

http://stat.sfu.ca/statgen/research/hapassoc.html
http://cran.r-project.org/web/packages/hapassoc

The following R functions are used for inference of trait associations with haplotypes and other covariates in generalized linear models. The functions are developed primarily for data collected in cohort or cross-sectional studies. They can accommodate uncertain haplotype phase and handle missing genotypes at some SNPs.

Maintainer: Kelly Burkett
Author(s): K. Burkett <kburkett@uottawa.ca>, B. McNeney <mcneney@sfu.ca>, J. Graham <jgraham@stat.sfu.ca>, with code for case-control data contributed by Zhijian Chen <z11chen@math.uwaterloo.ca>

License: GPL-2

Uses: Does not use any package

Released almost 2 years ago.


8 previous versions

Ratings

Overall:

  (0 votes)

Documentation:

  (0 votes)

Log in to vote.

Reviews

No one has written a review of hapassoc yet. Want to be the first? Write one now.


Related packages: Biodem, GenABEL, Geneland, HardyWeinberg, LDheatmap, SNPmaxsel, adegenet, bqtl, gap, genetics, haplo.ccs, haplo.stats, hierfstat, hwde, ibdreg, luca, ouch, pbatR, qtl, rmetasim(20 best matches, based on common tags.)


Search for hapassoc on google, google scholar, r-help, r-devel.

Visit hapassoc on R Graphical Manual.