penalized (0.9-42)

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L1 (lasso and fused lasso) and L2 (ridge) penalized estimation in GLMs and in the Cox model.

http://www.msbi.nl/goeman
http://cran.r-project.org/web/packages/penalized

A package for fitting possibly high dimensional penalized regression models. The penalty structure can be any combination of an L1 penalty (lasso and fused lasso), an L2 penalty (ridge) and a positivity constraint on the regression coefficients. The supported regression models are linear, logistic and poisson regression and the Cox Proportional Hazards model. Cross-validation routines allow optimization of the tuning parameters.

Maintainer: Jelle Goeman
Author(s): Jelle Goeman <j.j.goeman@lumc.nl>, Rosa Meijer, Nimisha Chaturvedi

License: GPL (>= 2)

Uses: survival, survival
Reverse depends: lmmlasso, multiPIM, pensim, subtype
Reverse suggests: caret, lda, peperr

Released 6 months ago.


19 previous versions

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Related packages: CoxBoost, gbm, glmpath, ipred, mboost, mvpart, pamr, party, randomSurvivalForest, rpart, LogicReg, rgp, RSNNS, rminer, ahaz, Cubist, CORElearn, arules, BayesTree, BPHO(20 best matches, based on common tags.)


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