seqinr (3.4-5)

3 users

Biological Sequences Retrieval and Analysis.

http://seqinr.r-forge.r-project.org/
http://cran.r-project.org/web/packages/seqinr

Exploratory data analysis and data visualization for biological sequence (DNA and protein) data. Seqinr includes utilities for sequence data management under the ACNUC system described in Gouy, M. et al. (1984) Nucleic Acids Res. 12:121-127 .

Maintainer: Simon Penel
Author(s): Delphine Charif [aut], Olivier Clerc [ctb], Carolin Frank [ctb], Jean R. Lobry [aut, cph], Anamaria Neculea [ctb], Leonor Palmeira [ctb], Simon Penel [cre], Guy Perrire [ctb]

License: GPL (>= 2)

Uses: ade4, segmented
Reverse depends: Autoplotprotein, BALCONY, bcool, DCODE, EnsCat, LncFinder, LSPFP, MEET, mlgt, plotprotein, rPlant, seq2R, sivipm, SMM
Reverse suggests: adegenet, biomartr, cubfits, EcoGenetics, phangorn, rPlant, SimRAD, TKF, vhica
Reverse enhances: spgs

Released 16 days ago.


27 previous versions

Ratings

Overall:

  3.7/5 (3 votes)

Documentation:

  3.3/5 (3 votes)

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Related packages: Biodem, GenABEL, HardyWeinberg, LDheatmap, SNPmaxsel, adegenet, bqtl, gap, genetics, hapassoc, haplo.ccs, haplo.stats, hierfstat, hwde, ibdreg, luca, ouch, pbatR, qtl, rmetasim(20 best matches, based on common tags.)


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