snp.plotter (0.5.1)

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snp.plotter.

https://github.com/cannin/snp_plotter or http://cbdb.nimh.nih.gov/~kristin/snp.plotter.html
http://cran.r-project.org/web/packages/snp.plotter

Creates plots of p-values using single SNP and/or haplotype data. Main features of the package include options to display a linkage disequilibrium (LD) plot and the ability to plot multiple datasets simultaneously. Plots can be created using global and/or individual haplotype p-values along with single SNP p-values. Images are created as either PDF/EPS files.

Maintainer: Augustin Luna
Author(s): Augustin Luna <augustin@mail.nih.gov>, Kristin K. Nicodemus <kristin.nicodemus@well.ox.ac.uk>, <nicodemusk@mail.nih.gov>

License: GPL (>= 2)

Uses: genetics, knitr

Released about 3 years ago.


4 previous versions

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Related packages: Biodem, GenABEL, Geneland, HardyWeinberg, LDheatmap, SNPmaxsel, adegenet, bqtl, gap, genetics, hapassoc, haplo.ccs, haplo.stats, hierfstat, hwde, ibdreg, luca, ouch, pbatR, qtl(20 best matches, based on common tags.)


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Visit snp.plotter on R Graphical Manual.