AbsFilterGSEA (0.1)

Improved False Positive Control of Gene-Permuting GSEA with Absolute Filtering.


Gene-permuting GSEA (or preranked GSEA) generates a lot of false positive gene-sets due to the inter-gene correlation in each gene set. Such false positives can be successfully reduced by filtering with the one-tailed absolute GSEA results. This package provides a function that performs gene-permuting GSEA calculation with or without the absolute filtering.

Maintainer: Sora Yoon
Author(s): Sora Yoon <yoonsora@unist.ac.kr>

License: GPL-2

Uses: Rcpp

Released about 2 years ago.