BICORN (0.1.0)

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Integrative Inference of De Novo Cis-Regulatory Modules.

Prior transcription factor binding knowledge and target gene expression data are integrated in a Bayesian framework for functional cis-regulatory module inference. Using Gibbs sampling, we iteratively estimate transcription factor associations for each gene, regulation strength for each binding event and the hidden activity for each transcription factor.

Maintainer: Xi Chen
Author(s): Xi Chen [aut, cre], Jianhua Xuan [aut]

License: GPL-2

Uses: knitr, rmarkdown

Released almost 2 years ago.



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