BisRNA (0.2.1)

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Analysis of RNA Cytosine-5 Methylation.

http://cran.r-project.org/web/packages/BisRNA

Bisulfite-treated RNA non-conversion in a set of samples is analysed as follows: each sample's Poisson parameter is estimated, and non-conversion p-values are calculated for each sample and adjusted for multiple testing. Finally, combined non-conversion p-value and standard error of the non-conversion are calculated on the intersection of the set of samples. A low combined non-conversion p-value points to methylation of the corresponding RNA cytosine, or another event blocking bisulfite conversion.

Maintainer: Carine Legrand
Author(s): Carine Legrand

License: GPL (>= 2)

Uses: knitr, MASS, testthat

Released 6 months ago.


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