DMRMark (1.1.1)

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DMR Detection by Non-Homogeneous Hidden Markov Model from Methylation Array Data.

http://cran.r-project.org/web/packages/DMRMark

Perform differential analysis for methylation array data. Detect differentially methylated regions (DMRs) from array M-values. The core is a Non-homogeneous Hidden Markov Model for estimating spatial correlation and a novel Constrained Gaussian Mixture Model for modeling the M-value pairs of each individual locus.

Maintainer: Linghao SHEN
Author(s): Linghao SHEN <sl013@ie.cuhk.edu.hk>

License: GPL

Uses: ellipse, MCMCpack, mvtnorm

Released over 2 years ago.


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