DrImpute (1.0)

0 users

Imputing Dropout Events in Single-Cell RNA-Sequencing Data.

https://github.com/ikwak2/DrImpute
http://cran.r-project.org/web/packages/DrImpute

R codes for imputing dropout events. Many statistical methods in cell type identification, visualization and lineage reconstruction do not account for dropout events ('PCAreduce', 'SC3', 'PCA', 't-SNE', 'Monocle', 'TSCAN', etc). 'DrImpute' can improve the performance of such software by imputing dropout events.

Maintainer: Il-Youp Kwak
Author(s): Il-Youp Kwak with contributions from Wuming Gong

License: GPL-3

Uses: Rcpp, irlba, devtools, roxygen2, knitr, rmarkdown

Released over 1 year ago.


Ratings

Overall:

  (0 votes)

Documentation:

  (0 votes)

Log in to vote.

Reviews

No one has written a review of DrImpute yet. Want to be the first? Write one now.


Related packages: Amelia, CVThresh, HardyWeinberg, Hmisc, ade4, cat, eigenmodel, experiment, ltm, memisc, mice, mitools, mix, norm, pan, randomForest, sbgcop, yaImpute, zoo, SNPassoc(20 best matches, based on common tags.)


Search for DrImpute on google, google scholar, r-help, r-devel.

Visit DrImpute on R Graphical Manual.