FLightR (0.4.8)

A Package for Reconstructing Animal Paths from Solar Geolocation Loggers.


Spatio-temporal locations of an animal are computed from annotated data with a hidden Markov model via particle filter algorithm. The package is relatively robust to varying degrees of shading. The hidden Markov model is described in Movement Ecology (Rakhimberdiev et al., 2015), general package description is in the Methods in Ecology and Evolution (Rakhimberdiev et al., 2017) and package accuracy assessed in the Journal of Avian Biology (Rakhimberdiev et al. 2016).

Maintainer: Eldar Rakhimberdiev
Author(s): Eldar Rakhimberdiev [aut, cre], Anatoly Saveliev [aut], Julia Karagicheva [aut], Simeon Lisovski [ctb]

License: GPL-3

Uses: bit, CircStats, circular, fields, GeoLight, ggmap, ggplot2, ggsn, maptools, mgcv, nlme, raster, RcppArmadillo, rgdal, rgeos, sp, truncnorm, testthat, knitr, rmarkdown, covr

Released about 1 year ago.