HMP (1.3.1)

Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP.

This package provides several functions to perform formal hypothesis testing, and power and sample size calculations for human microbiome experiments. Dirichlet-Multinomial distribution is proposed to model species abundance and ranked abundance data.

Maintainer: Berkley Shands
Author(s): Patricio S. La Rosa, Elena Deych, Berkley Shands, William D. Shannon

License: GPL-2

Uses: dirmult, MCMCpack
Reverse suggests: HMPTrees

Released over 6 years ago.