tag:crantastic.org,2005:/packages/HaplinLatest activity for Haplin2020-01-07T15:01:55Zcrantastic.orgtag:crantastic.org,2005:TimelineEvent/966162020-01-07T15:01:56Z2020-01-07T15:01:56ZHaplin was upgraded to version 7.2.2<a href="/packages/Haplin">Haplin</a> was <span class="action">upgraded</span> to version <a href="/packages/Haplin/versions/91831">7.2.2</a><br /><h3>Package description:</h3><p>Performs genetic association analyses of case-parent triad (trio) data with multiple markers. It can also incorporate complete or incomplete control triads, for instance independent control children. Estimation is based on haplotypes, for instance SNP haplotypes, even though phase is not known from the genetic data. 'Haplin' estimates relative risk (RR + conf.int.) and p-value associated with each haplotype. It uses maximum likelihood estimation to make optimal use of data from triads with missing genotypic data, for instance if some SNPs has not been typed for some individuals. 'Haplin' also allows estimation of effects of maternal haplotypes and parent-of-origin effects, particularly appropriate in perinatal epidemiology. 'Haplin' allows special models, like X-inactivation, to be fitted on the X-chromosome. A GxE analysis allows testing interactions between environment and all estimated genetic effects. The models were originally described in Gjessing, HK and Lie, RT (2006) <doi:10.1111/j.1529-8817.2005.00218.x>.</p>crantastic.orgtag:crantastic.org,2005:TimelineEvent/873812019-04-17T21:41:35Z2019-04-17T21:41:35ZHaplin was upgraded to version 7.1.0<a href="/packages/Haplin">Haplin</a> was <span class="action">upgraded</span> to version <a href="/packages/Haplin/versions/83071">7.1.0</a><br /><h3>Package description:</h3><p>Performs genetic association analyses of case-parent triad (trio) data with multiple markers. It can also incorporate complete or incomplete control triads, for instance independent control children. Estimation is based on haplotypes, for instance SNP haplotypes, even though phase is not known from the genetic data. 'Haplin' estimates relative risk (RR + conf.int.) and p-value associated with each haplotype. It uses maximum likelihood estimation to make optimal use of data from triads with missing genotypic data, for instance if some SNPs has not been typed for some individuals. 'Haplin' also allows estimation of effects of maternal haplotypes and parent-of-origin effects, particularly appropriate in perinatal epidemiology. 'Haplin' allows special models, like X-inactivation, to be fitted on the X-chromosome. A GxE analysis allows testing interactions between environment and all estimated genetic effects. The models were originally described in Gjessing, HK and Lie, RT (2006) <doi:10.1111/j.1529-8817.2005.00218.x>.</p>crantastic.orgtag:crantastic.org,2005:TimelineEvent/807932018-10-23T11:15:22Z2018-10-23T11:15:22Zcrantastic_production tagged Haplin with MissingData<a href="/users/146">crantastic_production</a> <span class="action">tagged</span> <a href="/packages/Haplin">Haplin</a> with <a href="/task_views/MissingData">MissingData</a>crantastic_productiontag:crantastic.org,2005:TimelineEvent/756272018-05-27T23:01:26Z2018-05-27T23:01:26ZHaplin was upgraded to version 7.0.0<a href="/packages/Haplin">Haplin</a> was <span class="action">upgraded</span> to version <a href="/packages/Haplin/versions/72189">7.0.0</a><br /><h3>Package description:</h3><p>Performs genetic association analyses of case-parent triad (trio) data with multiple markers. It can also incorporate complete or incomplete control triads, for instance independent control children. Estimation is based on haplotypes, for instance SNP haplotypes, even though phase is not known from the genetic data. 'Haplin' estimates relative risk (RR + conf.int.) and p-value associated with each haplotype. It uses maximum likelihood estimation to make optimal use of data from triads with missing genotypic data, for instance if some SNPs has not been typed for some individuals. 'Haplin' also allows estimation of effects of maternal haplotypes and parent-of-origin effects, particularly appropriate in perinatal epidemiology. 'Haplin' allows special models, like X-inactivation, to be fitted on the X-chromosome. A GxE analysis allows testing interactions between environment and all estimated genetic effects. The models were originally described in Gjessing, HK and Lie, RT (2006) <doi:10.1111/j.1529-8817.2005.00218.x>.</p>crantastic.orgtag:crantastic.org,2005:TimelineEvent/674922017-10-18T22:21:14Z2017-10-18T22:21:14ZHaplin was upgraded to version 6.2.1<a href="/packages/Haplin">Haplin</a> was <span class="action">upgraded</span> to version <a href="/packages/Haplin/versions/64552">6.2.1</a><br /><h3>Package description:</h3><p>Performs genetic association analyses of case-parent triad (trio) data with multiple markers. It can also incorporate complete or incomplete control triads, for instance independent control children. Estimation is based on haplotypes, for instance SNP haplotypes, even though phase is not known from the genetic data. 'Haplin' estimates relative risk (RR + conf.int.) and p-value associated with each haplotype. It uses maximum likelihood estimation to make optimal use of data from triads with missing genotypic data, for instance if some SNPs has not been typed for some individuals. 'Haplin' also allows estimation of effects of maternal haplotypes and parent-of-origin effects, particularly appropriate in perinatal epidemiology. 'Haplin' allows special models, like X-inactivation, to be fitted on the X-chromosome. A GxE analysis allows testing interactions between environment and all estimated genetic effects. The models were originally described in Gjessing, HK and Lie, RT (2006) <doi:10.1111/j.1529-8817.2005.00218.x>.</p>crantastic.orgtag:crantastic.org,2005:TimelineEvent/598932017-03-13T18:06:12Z2017-03-13T18:06:12ZHaplin was upgraded to version 6.2.0<a href="/packages/Haplin">Haplin</a> was <span class="action">upgraded</span> to version <a href="/packages/Haplin/versions/57328">6.2.0</a><br /><h3>Package description:</h3><p>Performs genetic association analyses of case-parent triad (trio) data with multiple markers. It can also incorporate complete or incomplete control triads, for instance independent control children. Estimation is based on haplotypes, for instance SNP haplotypes, even though phase is not known from the genetic data. Haplin estimates relative risk (RR + conf.int.) and p-value associated with each haplotype. It uses maximum likelihood estimation to make optimal use of data from triads with missing genotypic data, for instance if some SNPs has not been typed for some individuals. Haplin also allows estimation of effects of maternal haplotypes and parent-of-origin effects, particularly appropriate in perinatal epidemiology. Haplin allows special models, like X-inactivation, to be fitted on the X-chromosome. A GxE analysis allows testing interactions between environment and all estimated genetic effects.</p>crantastic.orgtag:crantastic.org,2005:TimelineEvent/515532016-05-26T16:00:48Z2016-05-26T16:00:48ZHaplin was upgraded to version 6.0.1<a href="/packages/Haplin">Haplin</a> was <span class="action">upgraded</span> to version <a href="/packages/Haplin/versions/49793">6.0.1</a><br /><h3>Package description:</h3><p>Performs genetic association analyses of case-parent triad (trio) data with multiple markers. It can also incorporate complete or incomplete control triads, for instance independent control children. Estimation is based on haplotypes, for instance SNP haplotypes, even though phase is not known from the genetic data. Haplin estimates relative risk (RR + conf.int.) and p-value associated with each haplotype. It uses maximum likelihood estimation to make optimal use of data from triads with missing genotypic data, for instance if some SNPs has not been typed for some individuals. Haplin also allows estimation of effects of maternal haplotypes and parent-of-origin effects, particularly appropriate in perinatal epidemiology. Haplin allows special models, like X-inactivation, to be fitted on the X-chromosome. A GxE analysis allows testing interactions between environment and all estimated genetic effects.</p>crantastic.orgtag:crantastic.org,2005:TimelineEvent/515202016-05-25T09:40:37Z2016-05-25T09:40:37ZHaplin was upgraded to version 6.0<a href="/packages/Haplin">Haplin</a> was <span class="action">upgraded</span> to version <a href="/packages/Haplin/versions/49764">6.0</a><br /><h3>Package description:</h3><p>Performs genetic association analyses of case-parent triad (trio) data with multiple markers. It can also incorporate complete or incomplete control triads, for instance independent control children. Estimation is based on haplotypes, for instance SNP haplotypes, even though phase is not known from the genetic data. Haplin estimates relative risk (RR + conf.int.) and p-value associated with each haplotype. It uses maximum likelihood estimation to make optimal use of data from triads with missing genotypic data, for instance if some SNPs has not been typed for some individuals. Haplin also allows estimation of effects of maternal haplotypes and parent-of-origin effects, particularly appropriate in perinatal epidemiology. Haplin allows special models, like X-inactivation, to be fitted on the X-chromosome. A GxE analysis allows testing interactions between environment and all estimated genetic effects.</p>crantastic.orgtag:crantastic.org,2005:TimelineEvent/407792015-05-15T20:11:01Z2015-05-15T20:11:01ZHaplin was upgraded to version 5.5<a href="/packages/Haplin">Haplin</a> was <span class="action">upgraded</span> to version <a href="/packages/Haplin/versions/40579">5.5</a><br /><h3>Package description:</h3><p>Performs genetic association analyses of case-parent triad (trio) data with multiple markers. It can also incorporate complete or incomplete control triads, for instance independent control children. Estimation is based on haplotypes, for instance SNP haplotypes, even though phase is not known from the genetic data. Haplin estimates relative risk (RR + conf.int.) and p-value associated with each haplotype. It uses maximum likelihood estimation to make optimal use of data from triads with missing genotypic data, for instance if some SNPs has not been typed for some individuals. Haplin also allows estimation of effects of maternal haplotypes and parent-of-origin effects, particularly appropriate in perinatal epidemiology. Haplin allows special models, like X-inactivation, to be fitted on the X-chromosome.</p>crantastic.orgtag:crantastic.org,2005:TimelineEvent/328832013-05-23T09:30:31Z2013-05-23T09:30:31ZHaplin was upgraded to version 5.3<a href="/packages/Haplin">Haplin</a> was <span class="action">upgraded</span> to version <a href="/packages/Haplin/versions/27999">5.3</a><br /><h3>Package description:</h3><p>Haplin performs a genetic association analysis of case-parent triad (trio) data with multiple markers. It can also incorporate complete or incomplete control triads, for instance independent control children. Estimation is based on haplotypes, for instance SNP haplotypes, even though phase is not known from the genetic data. Haplin estimates relative risk (RR + conf.int.) and p-value associated with each haplotype. It uses maximum likelihood estimation to make optimal use of data from triads with missing genotypic data, for instance if some SNPs has not been typed for some individuals. Haplin also allows estimation of effects of maternal haplotypes and parent-of-origin effects, particularly appropriate in perinatal epidemiology. Haplin allows special models, like X-inactivation, to be fitted on the X-chromosome.</p>crantastic.orgtag:crantastic.org,2005:TimelineEvent/323242013-05-02T13:30:34Z2013-05-02T13:30:34ZHaplin was upgraded to version 5.2<a href="/packages/Haplin">Haplin</a> was <span class="action">upgraded</span> to version <a href="/packages/Haplin/versions/27514">5.2</a><br /><h3>Package description:</h3><p>Haplin performs a genetic association analysis of case-parent triad (trio) data with multiple markers. It can also incorporate complete or incomplete control triads, for instance independent control children. Estimation is based on haplotypes, for instance SNP haplotypes, even though phase is not known from the genetic data. Haplin estimates relative risk (RR + conf.int.) and p-value associated with each haplotype. It uses maximum likelihood estimation to make optimal use of data from triads with missing genotypic data, for instance if some SNPs has not been typed for some individuals. Haplin also allows estimation of effects of maternal haplotypes and parent-of-origin effects, particularly appropriate in perinatal epidemiology. Haplin allows special models, like X-inactivation, to be fitted on the X-chromosome.</p>crantastic.orgtag:crantastic.org,2005:TimelineEvent/306012013-03-18T15:10:51Z2013-03-18T15:10:51ZHaplin was upgraded to version 5.0.2<a href="/packages/Haplin">Haplin</a> was <span class="action">upgraded</span> to version <a href="/packages/Haplin/versions/26068">5.0.2</a><br /><h3>Package description:</h3><p>Haplin performs a genetic association analysis of case-parent triad (trio) data with multiple markers. It can also incorporate complete or incomplete control triads, for instance independent control children. Estimation is based on haplotypes, for instance SNP haplotypes, even though phase is not known from the genetic data. Haplin estimates relative risk (RR + conf.int.) and p-value associated with each haplotype. It uses maximum likelihood estimation to make optimal use of data from triads with missing genotypic data, for instance if some SNPs has not been typed for some individuals. Haplin also allows estimation of effects of maternal haplotypes and parent-of-origin effects, particularly appropriate in perinatal epidemiology. Haplin allows special models, like X-inactivation, to be fitted on the X-chromosome.</p>crantastic.orgtag:crantastic.org,2005:TimelineEvent/301942013-03-08T16:50:34Z2013-03-08T16:50:34ZHaplin was upgraded to version 5.0.1<a href="/packages/Haplin">Haplin</a> was <span class="action">upgraded</span> to version <a href="/packages/Haplin/versions/25780">5.0.1</a><br /><h3>Package description:</h3><p>Haplin performs a genetic association analysis of case-parent triad (trio) data with multiple markers. It can also incorporate complete or incomplete control triads, for instance independent control children. Estimation is based on haplotypes, for instance SNP haplotypes, even though phase is not known from the genetic data. Haplin estimates relative risk (RR + conf.int.) and p-value associated with each haplotype. It uses maximum likelihood estimation to make optimal use of data from triads with missing genotypic data, for instance if some SNPs has not been typed for some individuals. Haplin also allows estimation of effects of maternal haplotypes and parent-of-origin effects, particularly appropriate in perinatal epidemiology. Haplin allows special models, like X-inactivation, to be fitted on the X-chromosome.</p>crantastic.orgtag:crantastic.org,2005:TimelineEvent/291612013-02-06T13:50:28Z2013-02-06T13:50:28ZHaplin was upgraded to version 5.0<a href="/packages/Haplin">Haplin</a> was <span class="action">upgraded</span> to version <a href="/packages/Haplin/versions/24938">5.0</a><br /><h3>Package description:</h3><p>Haplin performs a genetic association analysis of case-parent triad (trio) data with multiple markers. It can also incorporate complete or incomplete control triads, for instance independent control children. Estimation is based on haplotypes, for instance SNP haplotypes, even though phase is not known from the genetic data. Haplin estimates relative risk (RR + conf.int.) and p-value associated with each haplotype. It uses maximum likelihood estimation to make optimal use of data from triads with missing genotypic data, for instance if some SNPs has not been typed for some individuals. Haplin also allows estimation of effects of maternal haplotypes and parent-of-origin effects, particularly appropriate in perinatal epidemiology. Haplin allows special models, like X-inactivation, to be fitted on the X-chromosome.</p>crantastic.orgtag:crantastic.org,2005:TimelineEvent/204162012-03-16T10:10:30Z2012-03-16T10:10:30ZHaplin was upgraded to version 4.1<a href="/packages/Haplin">Haplin</a> was <span class="action">upgraded</span> to version <a href="/packages/Haplin/versions/17563">4.1</a><br /><h3>Package description:</h3><p>Haplin performs a genetic association analysis of case-parent triad (trio) data with multiple markers. It can also incorporate complete or incomplete control triads, for instance independent control children. Estimation is based on haplotypes, for instance SNP haplotypes, even though phase is not known from the genetic data. Haplin estimates relative risk (RR + conf.int.) and p-value associated with each haplotype. It uses maximum likelihood estimation to make optimal use of data from triads with missing genotypic data, for instance if some SNPs has not been typed for some individuals. Haplin also allows estimation of effects of maternal haplotypes, particularly appropriate in perinatal epidemiology.</p>crantastic.orgtag:crantastic.org,2005:TimelineEvent/62102010-05-26T08:50:44Z2010-05-26T08:50:44ZHaplin was upgraded to version 3.5<a href="/packages/Haplin">Haplin</a> was <span class="action">upgraded</span> to version <a href="/packages/Haplin/versions/7357">3.5</a><br /><h3>Package description:</h3><p>Haplin performs a genetic association analysis of case-parent triad (trio) data with multiple markers. It can also incorporate complete or incomplete control triads, for instance independent control children. Estimation is based on haplotypes, for instance SNP haplotypes, even though phase is not known from the genetic data. Haplin estimates relative risk (RR + conf.int.) and p-value associated with each haplotype. It uses maximum likelihood estimation to make optimal use of data from triads with missing genotypic data, for instance if some SNPs has not been typed for some individuals. Haplin also allows estimation of effects of maternal haplotypes, particularly appropriate in perinatal epidemiology.</p>crantastic.orgtag:crantastic.org,2005:TimelineEvent/36542010-01-10T08:11:09Z2010-01-10T08:11:09ZHaplin was upgraded to version 3.0.2<a href="/packages/Haplin">Haplin</a> was <span class="action">upgraded</span> to version <a href="/packages/Haplin/versions/6257">3.0.2</a><br /><h3>Package description:</h3><p>Haplin performs a genetic association analysis of case-parent triad (trio) data with multiple markers. It can also incorporate complete or incomplete control triads, for instance independent control children. Estimation is based on haplotypes, for instance SNP haplotypes, even though phase is not known from the genetic data. Haplin estimates relative risk (RR + conf.int.) and p-value associated with each haplotype. It uses maximum likelihood estimation to make optimal use of data from triads with missing genotypic data, for instance if some SNPs has not been typed for some individuals. Haplin also allows estimation of effects of maternal haplotypes, particularly appropriate in perinatal epidemiology.</p>crantastic.orgtag:crantastic.org,2005:TimelineEvent/3062009-07-16T09:34:27Z2009-07-16T09:34:27Zhkgjess tagged Haplin with Genetics<a href="/users/193">hkgjess</a> <span class="action">tagged</span> <a href="/packages/Haplin">Haplin</a> with <a href="/tags/Genetics">Genetics</a>hkgjess