HyPhy (1.0)

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Macroevolutionary phylogentic analysis of species trees and gene trees.


A Bay Area high level phylogenetic analysis package mostly using the birth-death process. Analysis of species tree branching times and simulation of species trees under a number of different time variable birth-death processes. Analysis of gene tree species tree reconciliations and simulations of gene trees in species trees.

Maintainer: Nathaniel Malachi Hallinan
Author(s): Nathaniel Malachi Hallinan

License: GPL-2

Uses: ape, R.utils

Released over 7 years ago.



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