LDheatmap (0.99-5)

2 users

Graphical Display of Pairwise Linkage Disequilibria Between SNPs.

http://stat.sfu.ca/statgen/research/ldheatmap.html
http://cran.r-project.org/web/packages/LDheatmap

Produces a graphical display, as a heat map, of measures of pairwise linkage disequilibria between SNPs. Users may optionally include the physical locations or genetic map distances of each SNP on the plot.

Maintainer: Brad McNeney
Author(s): Ji-Hyung Shin [aut], Sigal Blay [aut], Nicholas Lewin-Koh [ctb], Brad McNeney [aut, cre], Gloria Yang [ctb], Matthew Reyers [ctb], Jinko Graham [aut]

License: GPL-3

Uses: genetics, ggplot2, lattice
Reverse depends: gaston, synbreed

Released 1 day ago.


10 previous versions

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Related packages: Biodem, HardyWeinberg, SNPmaxsel, adegenet, bqtl, gap, genetics, hapassoc, haplo.stats, hierfstat, hwde, ibdreg, luca, ouch, pbatR, qtl, rmetasim, seqinr, snp.plotter, stepwise(20 best matches, based on common tags.)


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Visit LDheatmap on R Graphical Manual.