MDplot (1.0.1)

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Visualising Molecular Dynamics Analyses.

https://github.com/MDplot/MDplot
http://cran.r-project.org/web/packages/MDplot

Provides automatization for plot generation succeeding common molecular dynamics analyses. This includes straightforward plots, such as RMSD (Root-Mean-Square-Deviation) and RMSF (Root-Mean-Square-Fluctuation) but also more sophisticated ones such as dihedral angle maps, hydrogen bonds, cluster bar plots and DSSP (Definition of Secondary Structure of Proteins) analysis. Currently able to load GROMOS, GROMACS and AMBER formats, respectively.

Maintainer: Christian Margreitter
Author(s): Christian Margreitter [aut, cre], Chris Oostenbrink [aut]

License: GPL-3

Uses: gplots, gtools, MASS, RColorBrewer, R.rsp

Released 6 months ago.


4 previous versions

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