MiSPU (1.0)

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Microbiome Based Sum of Powered Score (MiSPU) Tests.

http://cran.r-project.org/web/packages/MiSPU

There is an increasing interest in investigating how the compositions of microbial communities are associated with human health and disease. In this package, we present a novel global testing method called aMiSPU, that is highly adaptive and thus high powered across various scenarios, alleviating the issue with the choice of a phylogenetic distance. Our simulations and real data analysis demonstrated that aMiSPU test was often more powerful than several competing methods while correctly controlling type I error rates.

Maintainer: Chong Wu
Author(s): Chong Wu, Wei Pan

License: GPL-2

Uses: ape, aSPU, cluster, Rcpp, vegan, ade4

Released over 3 years ago.


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