PhylogeneticEM (1.3.0)

0 users

Automatic Shift Detection using a Phylogenetic EM.

Implementation of the automatic shift detection method for Brownian Motion (BM) or OrnsteinUhlenbeck (OU) models of trait evolution on phylogenies. Some tools to handle equivalent shifts configurations are also available. See Bastide et al. (2017) and Bastide et al. (2018) .

Maintainer: Paul Bastide
Author(s): Paul Bastide [aut, cre], Mahendra Mariadassou [ctb]

License: GPL (>= 2) | file LICENSE

Uses: ape, capushe, foreach, gglasso, glmnet, LINselect, MASS, Matrix, plyr, Rcpp, robustbase, combinat, testthat, TreeSim, phytools, doParallel, knitr, rmarkdown

Released 4 months ago.

4 previous versions



  (0 votes)


  (0 votes)

Log in to vote.


No one has written a review of PhylogeneticEM yet. Want to be the first? Write one now.

Related packages:(20 best matches, based on common tags.)

Search for PhylogeneticEM on google, google scholar, r-help, r-devel.

Visit PhylogeneticEM on R Graphical Manual.