PlasmaMutationDetector (1.7.2)

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Tumor Mutation Detection in Plasma.

http://cran.r-project.org/web/packages/PlasmaMutationDetector

Aims at detecting single nucleotide variation (SNV) and insertion/deletion (INDEL) in circulating tumor DNA (ctDNA), used as a surrogate marker for tumor, at each base position of an Next Generation Sequencing (NGS) analysis. Mutations are assessed by comparing the minor-allele frequency at each position to the measured PER in control samples.

Maintainer: Yves Rozenholc
Author(s): Yves Rozenholc, Nicolas Pcuchet, Pierre Laurent-Puig

License: MIT + file LICENSE

Uses: ggplot2, robustbase

Released over 1 year ago.


5 previous versions

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