RAM (1.2.1.3)

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R for Amplicon-Sequencing-Based Microbial-Ecology.

http://cran.r-project.org/package=RAM
https://bitbucket.org/Wen_Chen/ram_releases/src/
http://cran.r-project.org/web/packages/RAM

Characterizing environmental microbiota diversity using amplicon-based next generation sequencing (NGS) data. Functions are developed to manipulate operational taxonomic unit (OTU) table, perform descriptive and inferential statistics, and generate publication-quality plots.

Maintainer: Wen Chen
Author(s): Wen Chen, Joshua Simpson, C. Andre Levesque

License: MIT + file LICENSE

Uses: ade4, ape, data.table, FD, ggmap, ggplot2, gplots, gridExtra, labdsv, lattice, MASS, permute, phangorn, phytools, plyr, RColorBrewer, reshape, reshape2, RgoogleMaps, scales, vegan, VennDiagram, mapproj, testthat, indicspecies, gtable

Released over 1 year ago.


3 previous versions

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