Rmagic (2.0.3)

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MAGIC - Markov Affinity-Based Graph Imputation of Cells.


MAGIC (Markov affinity-based graph imputation of cells) is a method for addressing technical noise in single-cell data, including under-sampling of mRNA molecules, often termed "dropout" which can severely obscure important gene-gene relationships. MAGIC shares information across similar cells, via data diffusion, to denoise the cell count matrix and fill in missing transcripts. Read more: van Dijk et al. (2018) .

Maintainer: Scott Gigante
Author(s): David van Dijk [aut], Scott Gigante [cre] (<https://orcid.org/0000-0002-4544-2764>)

License: GPL-2 | file LICENSE

Uses: ggplot2, Matrix, reticulate, readr, viridis, Seurat, phateR
Reverse suggests: iCellR

Released about 1 month ago.

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