Rphylopars (0.2.9)

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Phylogenetic Comparative Tools for Missing Data and Within-Species Variation.


Tools for performing phylogenetic comparative methods for datasets with with multiple observations per species (intraspecific variation or measurement error) and/or missing data. Performs ancestral state reconstruction and missing data imputation on the estimated evolutionary model, which can be specified as Brownian Motion, Ornstein-Uhlenbeck, Early-Burst, Pagel's lambda, kappa, or delta, or a star phylogeny.

Maintainer: Eric W. Goolsby
Author(s): Eric W. Goolsby, Jorn Bruggeman, Cecile Ane

License: GPL (>= 2)

Uses: ape, doBy, geiger, MASS, Matrix, mvnmle, phylolm, phytools, Rcpp
Reverse suggests: PhylogeneticEM

Released almost 3 years ago.

4 previous versions



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Related packages: Amelia, CVThresh, HardyWeinberg, Hmisc, ade4, cat, eigenmodel, experiment, ltm, memisc, mice, mitools, mix, norm, pan, randomForest, sbgcop, yaImpute, zoo, SNPassoc(20 best matches, based on common tags.)

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