SigTree (1.10.5)

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Identify and Visualize Significantly Responsive Branches in a Phylogenetic Tree.

http://cran.r-project.org/web/packages/SigTree

Provides tools to identify and visualize branches in a phylogenetic tree that are significantly responsive to some intervention, taking as primary inputs a phylogenetic tree (of class phylo) and a data frame (or matrix) of corresponding tip (OTU) labels and p-values.

Maintainer: John R. Stevens
Author(s): John R. Stevens and Todd R. Jones

License: GPL-3

Uses: ape, MASS, phyext2, phylobase, RColorBrewer, vegan

Released 8 months ago.


3 previous versions

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Related packages: PHYLOGR, apTreeshape, geiger, ggplot2, ouch, paleoTS, rmetasim, vegan, ape, phangorn, MCMCglmm, metafor, pegas, phylobase, adephylo, phyloclim, BoSSA, phyclust, TreeSim, TreePar(20 best matches, based on common tags.)


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Visit SigTree on R Graphical Manual.