TFMPvalue (0.0.6)

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Efficient and Accurate P-Value Computation for Position Weight Matrices.

https://github.com/ge11232002/TFMPvalue
http://cran.r-project.org/web/packages/TFMPvalue

In putative Transcription Factor Binding Sites (TFBSs) identification from sequence/alignments, we are interested in the significance of certain match score. TFMPvalue provides the accurate calculation of P-value with score threshold for Position Weight Matrices, or the score with given P-value. This package is an interface to code originally made available by Helene Touzet and Jean-Stephane Varre, 2007, Algorithms Mol Biol:2, 15.

Maintainer: Ge Tan
Author(s): Ge Tan <ge.tan09@imperial.ac.uk>

License: GPL-2

Uses: testthat

Released almost 2 years ago.


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