TFMPvalue (0.0.8)

Efficient and Accurate P-Value Computation for Position Weight Matrices.

https://github.com/ge11232002/TFMPvalue
http://cran.r-project.org/web/packages/TFMPvalue

In putative Transcription Factor Binding Sites (TFBSs) identification from sequence/alignments, we are interested in the significance of certain match score. TFMPvalue provides the accurate calculation of P-value with score threshold for Position Weight Matrices, or the score with given P-value. It is an interface to code originally made available by Helene Touzet and Jean-Stephane Varre, 2007, Algorithms Mol Biol:2, 15. Touzet and Varre (2007) .

Maintainer: Ge Tan
Author(s): Ge Tan <ge_tan@live.com>

License: GPL-2

Uses: testthat

Released over 1 year ago.