TipDatingBeast (1.1-0)

0 users

Using Tip Dates with Phylogenetic Trees in BEAST.

https://www.r-project.org
http://cran.r-project.org/web/packages/TipDatingBeast

Assists performing tip-dating of phylogenetic trees with BEAST BEAST is a popular software for phylogenetic analysis. The package assists the implementation of various phylogenetic tip- dating tests using BEAST. It contains two main functions. The first one allows preparing date randomization analyses, which assess the temporal signal of a data set. The second function allows performing leave-one-out analyses, which test for the consistency between independent calibration sequences and allow pinpointing those leading to potential bias. The included tutorial provides detailed step-by-step instructions. An expanded description of the package can be found in article: Rieux, A. and Khatchikian, C.E. (2017), TIPDATINGBEAST: an R package to assist the implementation of phylogenetic tip-dating tests using BEAST. Molecular Ecology Resources, 17: 608-613. .

Maintainer: Camilo Khatchikian
Author(s): Adrien Rieux, Camilo Khatchikian

License: GPL (>= 2)

Uses: DescTools, mclust, TeachingDemos

Released about 1 month ago.


8 previous versions

Ratings

Overall:

  (0 votes)

Documentation:

  (0 votes)

Log in to vote.

Reviews

No one has written a review of TipDatingBeast yet. Want to be the first? Write one now.


Related packages:(20 best matches, based on common tags.)


Search for TipDatingBeast on google, google scholar, r-help, r-devel.

Visit TipDatingBeast on R Graphical Manual.