biogram (1.6.3)

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N-Gram Analysis of Biological Sequences.

https://github.com/michbur/biogram
http://cran.r-project.org/web/packages/biogram

Tools for extraction and analysis of various n-grams (k-mers) derived from biological sequences (proteins or nucleic acids). Contains QuiPT (quick permutation test) for fast feature-filtering of the n-gram data.

Maintainer: Michal Burdukiewicz
Author(s): Michal Burdukiewicz [cre, aut] (<https://orcid.org/0000-0001-8926-582X>), Piotr Sobczyk [aut], Chris Lauber [aut], Dominik Rafacz [aut], Katarzyna Sidorczuk [ctb] (<https://orcid.org/0000-0001-6576-9054>)

License: GPL-3

Uses: combinat, entropy, partitions, slam, ggplot2, testthat, knitr

Released 5 days ago.


6 previous versions

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