biogram (1.3)

N-Gram Analysis of Biological Sequences.

https://github.com/michbur/biogram
http://cran.r-project.org/web/packages/biogram

Tools for extraction and analysis of various n-grams (k-mers) derived from biological sequences (proteins or nucleic acids). Contains QuiPT (quick permutation test) for fast feature-filtering of the n-gram data.

Maintainer: Michal Burdukiewicz
Author(s): Michal Burdukiewicz [cre, aut], Piotr Sobczyk [aut], Chris Lauber [aut]

License: GPL-3

Uses: bit, combinat, entropy, partitions, slam, ggplot2, testthat, knitr

Released almost 3 years ago.