biom (0.3.12)

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An interface package (beta) for the BIOM file format..

https://github.com/joey711/biom/
http://biom-format.org/
http://cran.r-project.org/web/packages/biom

This is an R package for interfacing with the BIOM format. This package includes basic tools for reading biom-format files, accessing and subsetting data tables from a biom object (which is more complex than a single table), as well as limited support for writing a biom-object back to a biom-format file. The design of this API is intended to match the python API and other tools included with the biom-format project, but with a decidedly "R flavor" that should be familiar to R users. This includes S4 classes and methods, as well as extensions of common core functions/methods.

Maintainer: Paul J. McMurdie
Author(s): Paul J. McMurdie <mcmurdie@stanford.edu> and the biom-format team http://biom-format.org/

License: GPL-2

Uses: Matrix, plyr, RJSONIO, testthat, knitr
Reverse suggests: qiimer

Released almost 4 years ago.


4 previous versions

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