bnpsd (1.0.1)

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Simulate Genotypes from the BN-PSD Admixture Model.

https://github.com/StoreyLab/bnpsd/
http://cran.r-project.org/web/packages/bnpsd

The Pritchard-Stephens-Donnelly (PSD) admixture model has k intermediate subpopulations from which n individuals draw their alleles dictated by their individual-specific admixture proportions. The BN-PSD model additionally imposes the Balding-Nichols (BN) allele frequency model to the intermediate populations, which therefore evolved independently from a common ancestral population T with subpopulation-specific FST (Wright's fixation index) parameters. The BN-PSD model can be used to yield complex population structures. Method described in Ochoa and Storey (2016) .

Maintainer: Alejandro Ochoa
Author(s): Alejandro Ochoa [aut, cre], John D. Storey [aut]

License: GPL-3

Uses: RColorBrewer, testthat, knitr, rmarkdown, popkin

Released 5 months ago.


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