cytometree (1.1.1)

Automated Cytometry Gating and Annotation.

Given the hypothesis of a bimodal distribution of cells for each marker, the algorithm constructs a binary tree, the nodes of which are subpopulations of cells. At each node, observed cells and markers are modeled by both a family of normal distributions and a family of bimodal normal mixture distributions. Splitting is done according to a normalized difference of AIC between the two families.

Maintainer: Alkhassim Chariff
Author(s): Chariff Alkhassim, Boris Hejblum

License: LGPL-3 | file LICENSE

Uses: ggplot2, igraph, mclust, Rcpp, knitr, rmarkdown, viridis

Released over 2 years ago.