effectR (1.0.2)

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Predicts Oomycete Effectors.

http://cran.r-project.org/web/packages/effectR

Predicts cytoplasmic effector proteins using genomic data by searching for motifs of interest using regular expression searches and hidden Markov models (HMM) based in Haas et al. (2009) .

Maintainer: Javier Tabima
Author(s): Javier Tabima [aut, cre], Niklaus J. Grunwald [ths]

License: GPL-2 | GPL-3

Uses: ggplot2, reshape2, rmarkdown, seqinr, shiny, viridis, testthat, knitr

Released over 1 year ago.


2 previous versions

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