effectR (1.0.1)

Predicts Oomycete Effectors.


Predicts cytoplasmic effector proteins using genomic data by searching for motifs of interest using regular expression searches and hidden Markov models (HMM) based in Haas et al. (2009) .

Maintainer: Javier Tabima
Author(s): Javier Tabima [aut, cre], Niklaus J. Grunwald [ths]

License: GPL-2 | GPL-3

Uses: ggplot2, reshape2, seqinr, shiny, viridis, testthat, knitr, rmarkdown

Released about 2 years ago.