exp2flux (0.1)

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Convert Gene EXPression Data to FBA FLUXes.


For a given metabolic model with well formed Gene-Protein-Reaction (GPR) associations and an expressionSet with their associated gene expression values, this package converts gene expression values to the FBA boundaries for each reaction based in the boolean rules described in its associated GPR.

Maintainer: Daniel Osorio
Author(s): Daniel Osorio[aut,cre], Kelly Botero[aut,cre], Janneth Gonzalez[aut], Andres Pinzon[aut]

License: GPL-2

Uses: igraph, sybil

Released over 3 years ago.



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