foieGras (0.2.2)

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Fit Continuous-Time State-Space Models for Filtering Argos Satellite (and Other) Telemetry Data.

http://cran.r-project.org/web/packages/foieGras

Fits continuous-time random walk and correlated random walk state-space models to filter Argos satellite location data. Template Model Builder ('TMB') is used for fast estimation. The Argos data can be: (older) least squares-based locations; (newer) Kalman filter-based locations with error ellipse information; or a mixture of both. Separate measurement models are used for these two data types. The models estimate two sets of location states corresponding to: 1) each observation, which are (usually) irregularly timed; and 2) user-specified time intervals (regular or irregular). Jonsen I, McMahon CR, Patterson TA, Auger-Methe M, Harcourt R, Hindell MA, Bestley S (2019) Movement responses to environment: fast inference of variation among southern elephant seals with a mixed effects model. Ecology 100:e02566 .

Maintainer: Ian Jonsen
Author(s): Ian Jonsen [aut, cre], Toby Patterson [aut, ctb]

License: AGPL-3

Uses: argosfilter, dplyr, ggplot2, gridExtra, lubridate, magrittr, sf, stringr, tibble, TMB, testthat, rgeos, knitr, rmarkdown, covr, units, rnaturalearth, ggspatial

Released about 1 month ago.


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