geneSLOPE (0.37.0)

Genome-Wide Association Study with SLOPE.

Genome-wide association study (GWAS) performed with SLOPE, short for Sorted L-One Penalized Estimation, a method for estimating the vector of coefficients in linear model. In the first step of GWAS, SNPs are clumped according to their correlations and distances. Then, SLOPE is performed on data where each clump has one representative.

Maintainer: Piotr Sobczyk
Author(s): Damian Brzyski [aut], Christine Peterson [aut], Emmanuel J. Candes [aut], Malgorzata Bogdan [aut], Chiara Sabatti [aut], Piotr Sobczyk [cre, aut]

License: GPL-3

Uses: bigmemory, ggplot2, SLOPE, testthat, knitr, shiny, rmarkdown

Released over 3 years ago.