genetics (1.3.8.1)
Population Genetics.
http://cran.r-project.org/web/packages/genetics
Classes and methods for handling genetic data. Includes classes to represent genotypes and haplotypes at single markers up to multiple markers on multiple chromosomes. Function include allele frequencies, flagging homo/heterozygotes, flagging carriers of certain alleles, estimating and testing for Hardy-Weinberg disequilibrium, estimating and testing for linkage disequilibrium, ...
Maintainer:
Gregory Warnes
Author(s): Gregory Warnes, with contributions from Gregor Gorjanc, Friedrich Leisch, and Michael Man.
License: GPL
Uses: combinat, gdata, gtools, MASS, mvtnorm
Reverse depends: boostSeq, forensic, GenABEL, introgress, luca, MasterBayes, PopGenReport, postgwas, snp.plotter
Reverse suggests: adegenet, forensim, GenABEL, HWxtest, postgwas, readGenalex
Released about 4 years ago.
6 previous versions
- genetics_1.3.8. Released almost 5 years ago.
- genetics_1.3.7. Released about 5 years ago.
- genetics_1.3.6. Released over 6 years ago.
- genetics_1.3.5. Released over 6 years ago.
- genetics_1.3.4. Released about 9 years ago.
- genetics_1.3.2. Released almost 10 years ago.
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Related packages: Biodem, GenABEL, HardyWeinberg, LDheatmap, SNPmaxsel, adegenet, bqtl, gap, hapassoc, haplo.ccs, haplo.stats, hierfstat, hwde, ibdreg, luca, ouch, pbatR, qtl, rmetasim, seqinr … (20 best matches, based on common tags.)
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Visit genetics on R Graphical Manual.
