iC10 (1.5)

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A Copy Number and Expression-Based Classifier for Breast Tumours.

http://cran.r-project.org/web/packages/iC10

Implementation of the classifier described in the paper 'Genome-driven integrated classification of breast cancer validated in over 7,500 samples' (Ali HR et al., Genome Biology 2014). It uses copy number and/or expression form breast cancer data, trains a pamr classifier (Tibshirani et al.) with the features available and predicts the iC10 group.

Maintainer: Oscar M. Rueda
Author(s): Oscar M Rueda

License: GPL-3

Uses: iC10TrainingData, impute, pamr

Released 5 months ago.


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