iTOP (1.0.2)

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Inferring the Topology of Omics Data.

Infers a topology of relationships between different datasets, such as multi-omics and phenotypic data recorded on the same samples. We based this methodology on the RV coefficient (Robert & Escoufier, 1976, ), a measure of matrix correlation, which we have extended for partial matrix correlations and binary data (Aben et al., 2018, ).

Maintainer: Nanne Aben
Author(s): Nanne Aben

License: GPL-2

Uses: corpcor, Matrix, pcalg, NMF, knitr, rmarkdown

Released over 1 year ago.

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