jointseg (1.0.1)

Joint Segmentation of Multivariate (Copy Number) Signals.

https://github.com/mpierrejean/jointseg
http://cran.r-project.org/web/packages/jointseg

Methods for fast segmentation of multivariate signals into piecewise constant profiles and for generating realistic copy-number profiles. A typical application is the joint segmentation of total DNA copy numbers and allelic ratios obtained from Single Nucleotide Polymorphism (SNP) microarrays in cancer studies. The methods are described in Pierre-Jean, Rigaill and Neuvial (2015) .

Maintainer: Morgane Pierre-Jean
Author(s): Morgane Pierre-Jean [aut, cre], Pierre Neuvial [aut], Guillem Rigaill [aut]

License: LGPL (>= 2.1)

Uses: acnr, matrixStats, R.cache, digest, testthat, changepoint, PSCBS, knitr, rmarkdown
Reverse depends: SegCorr

Released about 1 year ago.