kmer (1.0.0)

Fast K-Mer Counting and Clustering for Biological Sequence Analysis.

Contains tools for rapidly computing distance matrices and clustering large sequence datasets using fast alignment-free k-mer counting and recursive k-means partitioning. See Vinga and Almeida (2003) for a review of k-mer counting methods and applications for biological sequence analysis.

Maintainer: Shaun Wilkinson
Author(s): Shaun Wilkinson [aut, cre]

License: GPL-3

Uses: openssl, phylogram, Rcpp, ape, testthat, knitr, rmarkdown

Released over 1 year ago.