ktspair (1.0)

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k-Top Scoring Pairs for Microarray Classification.


These functions compute the k best pairs of genes used to classify samples based on the relative rank of the genes expression within each profile. A score based on the sensitivity and the specificity is calculated for every possible pair. The k pairs with the highest score will be selected with the restriction that a gene can appear in at most one pair. The value of k is either set as a parameter chosen by the user or computed through crossvalidation. Other functions related to the k-TSP are also available, for example the functions prediction, summary, plot, etc. can be found in the package.

Maintainer: Julien Damond
Author(s): Julien Damond <julien.damond@gmail.com>

License: GPL-2

Uses: Does not use any package

Released almost 6 years ago.



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