lmem.qtler (0.1.1)

Linear Mixed Effects Models for QTL Mapping for Multienvironment and Multitrait Analysis.


Performs QTL mapping analysis for balanced and for multi-environment and multi-trait analysis using mixed models. Balanced population, single trait, single environment QTL mapping is performed through marker-regression (Haley and Knott (1992) , Martinez and Curnow (1992) , while multi-environment and multi-trait QTL mapping is performed through linear mixed models. These functions could use any of the following populations: double haploid, F2, recombinant inbred lines, back-cross, and 4-way crosses. Performs a Single Marker Analysis, a Single Interval Mapping, or a Composite Interval Mapping analysis, and then constructs a final model with all of the relevant QTL.

Maintainer: Gaston Quero
Author(s): Lucia Gutierrez [aut], Gaston Quero [aut, cre], Schubert Fernandez [aut], Sofia Brandariz [aut], Sebastian Simondi [ctb]

License: GPL-3

Uses: lattice, lme4, pastecs, qtl, stringr, testthat, knitr, rmarkdown

Released over 2 years ago.