phangorn (2.2.0)

Phylogenetic Analysis in R.

https://github.com/KlausVigo/phangorn
http://cran.r-project.org/web/packages/phangorn

Phylogenetic analysis in R: Estimation of phylogenetic trees and networks using Maximum Likelihood, Maximum Parsimony, distance methods and Hadamard conjugation.

Maintainer: Klaus Schliep
Author(s): Klaus Schliep [aut, cre], Emmanuel Paradis [aut], Leonardo de Oliveira Martins [aut], Alastair Potts [aut], Tim W. White [aut], Cyrill Stachniss [ctb], Michelle Kendall [ctb]

License: GPL (>= 2)

Uses: ape, fastmatch, igraph, magrittr, Matrix, quadprog, Rcpp, rgl, seqinr, xtable, flashClust, testthat, knitr, rmarkdown
Reverse depends: apex, coalescentMCMC, corHMM, MonoPhy, OUwie, phybreak, phytools, poppr, recluster
Reverse suggests: CongreveLamsdell2016, markophylo, Quartet, tracerer

Released about 2 years ago.