phybreak (0.2.0)

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Analysis of Outbreaks with Sequence Data.

http://cran.r-project.org/web/packages/phybreak

Implementation the outbreak analysis method described by Klinkenberg et al (2017) . Simulate outbreaks, analyse datasets by creating samples from the posterior distribution with a Markov-Chain Monte Carlo sampler, and summarize the output.

Maintainer: Don Klinkenberg
Author(s): Don Klinkenberg [aut, cre]

License: GPL (>= 2)

Uses: ape, phangorn, Rcpp, stringr, coda, testthat, phytools, knitr, OutbreakTools, rmarkdown

Released 4 months ago.


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