plmDE (1.0)

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Additive partially linear models for differential gene expression analysis.

A set of tools for identifying genes whose differential expression is associated with measurements of other covariates on a continuous scale. These methods rely on generalized additive partially linear models which can be fitted efficiently using a B-spline basis approximation. Still under development: methods for interfacing with objects extending the eSet class and a function to pass linear models in edgeR and DEseq format.

Maintainer: Jonas
Author(s): Jonas Mueller

License: GPL (>= 2)

Uses: MASS, R.oo

Released about 7 years ago.



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