plsgenomics (1.3)

PLS Analyses for Genomics.

Routines for PLS-based genomic analyses. They implements PLS methods for classification with microarray data and prediction of transcription factor activities from combined ChIP-chip analysis. The >=1.2-1 versions include two new classification methods for microarray data: GSIM and Ridge PLS. The >=1.3 versions includes an other new classification method combining variable selection and compression in logistic regression context: RIRLS-SPLS; and an adaptive version of the sparse PLS.

Maintainer: Ghislain Durif
Author(s): Anne-Laure Boulesteix <>, Ghislain Durif <>, Sophie Lambert-Lacroix <>, Julie Peyre <>, and Korbinian Strimmer <>.

License: GPL (>= 2)

Uses: boot, MASS
Reverse depends: MAclinical
Reverse suggests: PLSbiplot1

Released almost 5 years ago.