rabhit (0.1.1)

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Inference Tool for Antibody Haplotype.

https://yaarilab.bitbucket.io/RAbHIT/
http://cran.r-project.org/web/packages/rabhit

Infers V-D-J haplotypes and gene deletions from AIRR-seq data, based on IGHJ, IGHD or IGHV as anchor, by adapting a Bayesian framework. It also calculates a Bayes factor, a number that indicates the certainty level of the inference, for each haplotyped gene. Citation: Gidoni, et al (2019) .

Maintainer: Ayelet Peres
Author(s): Ayelet Peres [aut, cre], Moriah Gidoni [aut], Gur Yaari [aut, cph]

License: CC BY-SA 4.0

Uses: alakazam, cowplot, data.table, dendextend, dplyr, ggdendro, ggplot2, gridExtra, gtable, gtools, htmlwidgets, plotly, RColorBrewer, reshape2, rlang, stringi, tidyr, tigger, knitr, rmarkdown

Released 3 months ago.


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