rase (0.2-22)

Range Ancestral State Estimation for Phylogeography and Comparative Analyses.


The rase package primarily implements the Range Ancestral State Estimation for phylogeography described in Quintero, I., Keil, P., Jetz, W., & Crawford, F. W. (2015). Historical Biogeography Using Species Geographical Ranges. Systematic biology, 64(6), 1059-1073. It also includes Bayesian inference of ancestral states under a Brownian Motion model of character evolution and Maximum Likelihood estimation of rase for n-dimensional data. Visualizing functions in 3D are implemented using the rgl package.

Maintainer: Ignacio Quintero
Author(s): Ignacio Quintero [aut, cre], Forrest W. Crawford [aut], Petr Keil [aut]

License: GPL (>= 2)

Uses: ape, mvtnorm, polyCub, rgl, sm, spatstat, rpanel, sp, ggmcmc

Released almost 4 years ago.