rtfbs (0.3.15)

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Transcription Factor Binding Site Identification Tool.


Identifies and scores possible Transcription Factor Binding Sites and allows for FDR analysis and pruning. It supports splitting of sequences based on size or a specified GFF, grouping by G+C content, and specification of Markov model order. The heavy lifting is done in C while all results are made available via R.

Maintainer: Ritika Ramani
Author(s): Nicholas Peterson, Andre Martins, Melissa Hubisz, and Adam Siepel

License: BSD_3_clause + file LICENSE

Uses: rphast

Released 3 months ago.

8 previous versions



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